R语言TCGAbiolinks怎么安装R语言不了？

来源：蜘蛛抓取(WebSpider) 时间：2023-10-04 13:05 标签： 怎么安装R语言

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I am trying to run the following command in RStudio (version 3.1.0 on Windows 7 64-bit):devtools::install_github("data.table", "Rdatatable")I get the following output:Installing github repo data.table/master from RdatatableDownloading master.zip from https://github.com/Rdatatable/data.table/archive/master.zipInstalling package from C:\Users\cle1394\AppData\Local\Temp\Rtmpcrtx8Y/master.zipInstalling data.table"C:/PROGRA~1/R/R-31~1.0/bin/x64/R" --vanilla CMD build \"C:\Users\cle1394\AppData\Local\Temp\Rtmpcrtx8Y\devtoolsd343a7c2b57\data.table-master" --no-manual \--no-resave-data* checking for file 'C:\Users\cle1394\AppData\Local\Temp\Rtmpcrtx8Y\devtoolsd343a7c2b57\data.table-master/DESCRIPTION' ... OK* preparing 'data.table':* checking DESCRIPTION meta-information ... OK* cleaning src* installing the package to build vignettesWarning: running command '"C:/PROGRA~1/R/R-31~1.0/bin/x64/Rcmd.exe" INSTALL -l "C:\Users\cle1394\AppData\Local\Temp\RtmpMlGNWp\Rinst2786d3f6fc5" --no-multiarch "C:/Users/cle1394/AppData/Local/Temp/RtmpMlGNWp/Rbuild27856a15b8f/data.table"' had status 1-----------------------------------* installing *source* package 'data.table' ...** libsWarning: running command 'make -f "Makevars" -f "C:/PROGRA~1/R/R-31~1.0/etc/x64/Makeconf" -f "C:/PROGRA~1/R/R-31~1.0/share/make/winshlib.mk" SHLIB="data.table.dll" WIN=64 TCLBIN=64 OBJECTS="assign.o bmerge.o chmatch.o dogroups.o fastmean.o fastradixdouble.o fastradixint.o fcast.o fmelt.o forder.o fread.o gsumm.o init.o rbindlist.o reorder.o uniqlist.o vecseq.o wrappers.o"' had status 127ERROR: compilation failed for package 'data.table'* removing 'C:/Users/cle1394/AppData/Local/Temp/RtmpMlGNWp/Rinst2786d3f6fc5/data.table'-----------------------------------ERROR: package installation failedError: Command failed (1)I have tried installing Rtools; the screenshots of the installation are found below:After restarting RStudio, and running the command again, I get the same output. Is there something I am missing? Why can't I install this package from github?Edit: Added sessionInfo():> sessionInfo()R version 3.1.0 (2014-04-10)Platform: x86_64-w64-mingw32/x64 (64-bit)locale:[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C[5] LC_TIME=English_United States.1252attached base packages:[1] stats graphics grDevices utils datasets methods baseloaded via a namespace (and not attached):[1] devtools_1.5 digest_0.6.4 evaluate_0.5.5 httr_0.3 memoise_0.2.1 parallel_3.1.0[7] RCurl_1.95-4.1 stringr_0.6.2 tools_3.1.0 whisker_0.3-2Edit: Added has_devel():> has_devel()Error: could not find function "has_devel"解决方案Just to answer an open question.The install_github function accepts build_vignettes logical (not documented as it is passed to dots for install function).In case of error on building vignettes you may use: devtools::install_github("Rdatatable/data.table", build_vignettes=FALSE).Argument build_vignettes has recently changed its default value from TRUE to FALSE, so using recent version of devtools you don't have to care about it.

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